bayflux.core.fluxes

Module Contents

Classes

FluxVector

Class to store a flux vector associated with a ReactionNetwork.

class bayflux.core.fluxes.FluxVector(model, fluxes=False)

Class to store a flux vector associated with a ReactionNetwork.

Args:

model (bayflux.ReactionNetwork): The model this flux vector is associated with. fluxes (numpy.array, optional): An array of np.float64 fluxes in the same order as model.variables. Can also optionally be a dict of 2-tuples, where keys are reaction ids and values represent (forward flux, backwards flux)

Attributes:

model (bayflux.ReactionNetwork): The model this flux vector is associated with. fluxes (numpy.array, optional): An array of np.float64 fluxes in the same order as model.variables.

to_Series()

convert the flux vector into a Pandas Series object.

Returns:

A pandas.Series object where each index represents a model variable name, and each value is a 64 bit flux for that variable.

__getitem__(key)
__repr__()

Return repr(self).

_repr_html_()